The problem with iWeb, is that it wants to create its OWN folder, instead of simply appending files into the existing structure.
The instructions for publishing to the primary domain is correct. Otherwise, iWeb will attempt to create the directory structure that is already there. Files for the primary domain belong in the PUBLIC_HTML folder. If you are publishing to a subdomain or to an add-on domain, then the path will look like this:
Here's the reference to publishing with iWeb for Web Hosting Hub:
Publishing with Web
If you have any further questions, please contact technical support or leave a comment at the bottom of the page.
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